AnnData

Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.

Source: github.com/K-Dense-AI/scientific-agent-skills/tree/main/scientific-skills/anndata · License: MIT